Intein-Mediated Protein trans-Splicing of the Recombinant Streptavidin on Magnetosomes

Molecular Biology - When expressing streptavidin recombinant polypeptide on magnetosomes (called bacterial magnetic nanoparticles, or BMPs), the presence of endogenous bacterial biotin might be...     

Genetic Analysis of Human Adenovirus Type 7 Strains Circulating in Different Parts of China

To investigate the molecular epidemiology and genetic variation of human adenovirus type 7(HAdV-7) in children with acute respiratory infections(ARI) in China. HAdV-7-positive respiratory samples collected from children with ARI in Beijing, Shijiazhuang, Wenzhou and Guangzhou from 2014–2018 were selected for gene amplification and sequence analysis. Fifty-seven HAdV-7 clinical strains with hexon, penton base and fiber gene sequences were obtained. Meanwhile17 strains were selected randomly from different cities for whole genome sequencing. Phylogenetic and variation analyses were performed based on the obtained sequences, HAdV-7 prototype strain Gomen(AY594255), vaccine strains(AY495969 and AY594256) and representative sequences of strains. The phylogenetic trees constructed based on whole genome sequences, major capsid protein genes(hexon, penton base and fiber) and the early genes(E1, E2, E3 and E4) were not completely consistent. The HAdV-7 strains obtained in this study always clustered with most of the circulating strains worldwide from the 1980 s to the present. Compared with the HAdV-7 prototype strain Gomen(AY594255), some amino acid mutations in loop1 and loop2 of hexon and the RGD loop region of the penton base gene were observed. Recombination analysis showed that partial regions of 55 k Da protein and 100 kDa hexon-assembly associated protein genes among all HAdV-7 strains in this study were from HAdV-16 and HAdV-3, respectively. Our study demonstrated the molecular evolution characteristics of HAdV-7 strains circulating in China and provided basic reference data for the prevention, control and vaccine development of HAdV-7.     

Genome‐wide distribution and functions of the AAE complex in epigenetic regulation in Arabidopsis

Heterochromatin is widespread in eukaryotic genomes and has diverse impacts depending on its genomic context. Previous studies have shown that a protein complex, the ASI1‐AIPP1‐EDM2 (AAE) complex, participates in polyadenylation regulation of several intronic heterochromatin‐containing genes. However, the genome‐wide functions of AAE are still unknown. Here, we show that the ASI1 and EDM2 mostly target the common genomic regions on a genome‐wide level and preferentially interacts with genetic heterochromatin. Polyadenylation (poly(A) sequencing reveals that AAE complex has a substantial influence on poly(A) site usage of heterochromatin‐containing genes, including not only intronic heterochromatin‐containing genes but also the genes showing overlap with heterochromatin. Intriguingly, AAE is also involved in the alternative splicing regulation of a number of heterochromatin‐overlapping genes, such as the disease resistance gene RPP4. We provided evidence that genic heterochromatin is indispensable for the recruitment of AAE in polyadenylation and splicing regulation. In addition to conferring RNA processing regulation at genic heterochromatin‐containing genes, AAE also targets some transposable elements (TEs) outside of genes (including TEs sandwiched by genes and island TEs) for epigenetic silencing. Our results reveal new functions of AAE in RNA processing and epigenetic silencing, and thus represent important advances in epigenetic regulation.     

罗氏沼虾MrLc3a基因cDNA的克隆及在副溶血弧菌胁迫下的表达分析

虾类和果蝇同属节肢动物.果蝇的相关研究表明自噬与免疫关系密切,而虾类自噬机制研究鲜少.微管相关蛋白1轻链3 (microtubule-associated protein 1 light chain 3,Lc3)与自噬基因Atg8同源,其与自噬体的形成密切相关,是自噬活性的标志分子.本研究利用RACE技术克隆了罗氏沼虾的MrLc3a基因的全长cDNA,用RT-qPCR检测了该基因在罗氏沼虾主要组织中的表达量;并研究了正常和副溶血弧菌感染两种情况下MrLc3a基因和免疫基因Relish的表达变化情况,为其在病害防御方面的应用提供了前期数据.试验结果表明:MrLc3a基因全长653 bp,其中包括195 bp的5'-UTR、378 bp的ORF开放阅读框和80 bp的3'-UTR,共编码126个氨基酸;序列比对结果显示,其编码的氨基酸序列和南美白对虾Lc3a编码的氨基酸序列具有较高的同源性,并在系统发育树上聚为一支;RT-qPCR结果显示,MrLc3a基因在罗氏沼虾各个组织均有表达,其中在脑、鳃、胃中的表达量较高,在肝胰腺和性腺中的表达量较少;副溶血弧菌感染罗氏沼虾后显著影响了MrLc3a和Relish基因在罗氏沼虾肝胰腺组织中的转录情况,MrLc3a和Relish基因随时间变化都呈现出先上升后下降的趋势,表明MrLc3a基因通过参与细胞自噬过程而参与了免疫反应.     

双依他尼酸乙醇胺对谷胱甘肽S-转硫酶mu的选择性抑制作用

谷胱甘肽S-转移酶(GST)的同工酶mu(GSTM)高表达与卵巢癌顺铂耐药有关.以GST非选择性抑制剂依他尼酸设计二价潜抑制剂双依他尼酸乙醇胺(aminoethanol di-ethacrynic acid,ADEA),测定ADEA及其与还原型谷胱甘肽(glutathione,GSH)加合物对GST同工酶亚型A1、P1、M2的半抑制浓度(IC50)、抑制类型、结合比和结合动力学.ADEA本身对GSTM2的IC50比GSTA1低300倍,比GSTP1低3 000倍;ADEA与GSH在酶催化下反应10 min所得产物,对上述3种同工酶的IC50 分别降低5、57、200倍.ADEA本身和产物对GSTM2相对于底物CDNB是反竞争性抑制剂,ADEA本身对GSTM2相对于底物GSH是混合性抑制剂,ADEA与GSH产物对GSTM2相对于底物GSH是反竞争性抑制剂.分析ADEA对GSTM2荧光静态淬灭表明ADEA及其产物是二价结合;分析荧光和酶活性随时间变化表明酶与ADEA本身结合速度比其产物CDNB慢10倍.ADEA是有效的GSTM2选择性二价潜抑制剂.     

Sustained expression of MCP-1 induced low wall shear stress loading in conjunction with turbulent flow on endothelial cells of intracranial aneurysm

Shear stress was reported to regulate the expression of AC007362, but its underlying mechanisms remain to be explored. In this study, to isolate endothelial cells of blood vessels, unruptured and ruptured intracranial aneurysm (IA) tissues were collected from IA patients. Subsequently, quantitative real-time PCR (qRT-PCR), Western blot and luciferase assay were performed to investigate the relationships between AC007362, miRNAs-493 and monocyte chemoattractant protein-1 (MCP-1) in human umbilical vein endothelial cells (HUVECs) exposed to shear stress. Reduced representation bisulphite sequencing (RRBS) was performed to assess the level of DNA methylation in AC007362 promoter. Accordingly, AC007362 and MCP-1 were significantly up-regulated while miR-493 was significantly down-regulated in HUVECs exposed to shear stress. AC007362 could suppress the miR-493 expression and elevate the MCP-1 expression, and miR-493 was shown to respectively target AC007362 and MCP-1. Moreover, shear stress in HUVECs led to the down-regulated DNA methyltransferase 1 (DNMT1), as well as the decreased DNA methylation level of AC007362 promoter. Similar results were also observed in ruptured IA tissues when compared with unruptured IA tissues. In conclusion, this study presented a deep insight into the operation of the regulatory network of AC007362, miR-493 and MCP-1 upon shear stress. Under shear stress, the expression of AC007362 was enhanced by the inhibited promoter DNA methylation, while the expression of MCP-1 was enhanced by sponging the expression of miR-493.     

Poly(ADP-ribose) polymerase inhibitor PJ34 protects against UVA-induced oxidative damage in corneal endothelium

Apoptosis - Fuchs endothelial corneal dystrophy (FECD) is one of the main causes for corneal endothelial blindness, which is characterized by the progressive decline of corneal endothelial cells....     

不同放牧强度对赛罕乌拉草原蜘蛛多样性的影响

蜘蛛作为草原生态系统中的主要消费者, 对维系草原生物多样性和生态系统功能具有重大意义。放牧是人类利用草原最普遍的方式, 了解放牧对蜘蛛多样性的影响具有重要生态学意义。本研究调查了内蒙古赛罕乌拉草原上5个不同放牧强度样地中的蜘蛛多样性, 通过单因素方差分析(one-way analysis of variance)比较各样地中的蜘蛛多样性, 非度量多维标度分析(non-metric multidimensional scale, NMDS)和相似性分析(analysis of similarities, ANOSIM)比较各样地间的蜘蛛物种组成相似性, 再结合相关性分析探讨了植被高度对蜘蛛多样性的影响。结果表明: 重度放牧强度样地的蜘蛛多样性显著低于其他未放牧及轻度放牧样地; 具体到常见科上, 放牧强度对织网型的园蛛物种数和个体数影响显著, 而对游猎型的狼蛛、跳蛛却不明显; 织网型蜘蛛主要受植被结构影响, 而游猎型蜘蛛更可能受潜在猎物可得性的影响。NMDS分析表明不同放牧强度下, 蜘蛛类群的物种组成呈现明显的梯度变化, 放牧强度越低, 物种组成和未放牧样地越相近。相关性分析表明草原植被高度与蜘蛛多样性总体上呈正相关关系, 即植被高度越高, 蜘蛛多样性越高。其中依靠植物构建蛛网的园蛛科和在植物上层伏击猎物的蟹蛛科、逍遥蛛科等与植被高度显著相关。这说明植物资源及其空间异质性可能对草原蜘蛛多样性起着主导作用。因此, 降低放牧强度有助于保护草原蜘蛛群落的多样性, 特别有利于织网型蜘蛛。